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UROS protein (Chlamydomonas reinhardtii) - STRING interaction network
"UROS" - Uroporphyrinogen-iii synthase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UROSUroporphyrinogen-iii synthase (297 aa)    
Predicted Functional Partners:
PBGD1
Porphobilinogen deaminase (349 aa)
   
 
  0.958
PBGD2
Porphobilinogen deaminase (380 aa)
   
 
  0.957
UROD2
Uroporphyrinogen decarboxylase (394 aa)
     
 
  0.922
UROD1
Uroporphyrinogen-iii decarboxylase (390 aa)
     
 
  0.919
CPX2
Coproporphyrinogen III oxidase (349 aa)
     
   
  0.541
CPX1
Coproporphyrinogen III oxidase (365 aa)
     
   
  0.486
TIM9
Mitochondrial inner membrane translocase (103 aa)
     
   
  0.474
EDP06968
Rieske ferredoxin (145 aa)
     
   
  0.469
EDP08044
Flagellar flavodoxin (201 aa)
           
  0.468
PLAP10
Plastid lipid associated protein (314 aa)
           
  0.468
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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