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STRINGSTRING
EDP00792 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00792" - Cell wall protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00792Cell wall protein (577 aa)    
Predicted Functional Partners:
VSP3
Extracellular matrix protein (474 aa)
           
  0.876
EDP00619
Predicted protein (717 aa)
           
  0.869
SAD1
Minus agglutinin protein (2547 aa)
           
  0.725
CGL70
Predicted protein (448 aa)
           
  0.713
PR46a
Ubiquitin-fold modifier 1; Ubiquitin-like modifier protein which binds to a number of as yet unidentified target proteins (96 aa)
           
  0.678
SPL2
SPL2p; Splicing factor 3a, subunit 2 (287 aa)
           
  0.678
PKY1
Protein tyrosine kinase (1168 aa)
           
  0.678
PR46b
Coiled-coil domain-containing protein 103 homolog; Dynein-attachment factor required for cilia motility (267 aa)
           
  0.678
UTP1
Nucleolar protein, component of the U3 processome; UTP1p (996 aa)
           
  0.678
ARS1
Arylsulfatase (654 aa)
     
   
  0.656
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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