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EDP00820 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00820" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00820Predicted protein (265 aa)    
Predicted Functional Partners:
EDP03412
Predicted protein (203 aa)
 
   
      0.670
EDO98649
Ser/thr kinase (312 aa)
     
   
0.557
ATF1
Glucosamine--fructose-6-phosphate aminotransferase (679 aa)
     
        0.506
EDO97083
Predicted protein (190 aa)
     
        0.502
EDO96725
Predicted protein (111 aa)
     
        0.494
EDO98081
Predicted protein (176 aa)
     
        0.490
EDP00860
Predicted protein (1033 aa)
     
   
  0.482
COPZ1
Zeta-cop, subunit of COP-I complex (184 aa)
     
        0.475
EDO98870
Predicted protein (299 aa)
   
 
 
0.460
EDP03411
Predicted protein (252 aa)
   
 
 
0.458
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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