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EDP00834 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00834" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00834Predicted protein (455 aa)    
Predicted Functional Partners:
EDP05775
Predicted protein (465 aa)
   
0.996
ARP4
Actin-related protein (458 aa)
     
  0.985
EDP01523
Predicted protein (366 aa)
     
  0.982
EDP10031
Predicted protein (116 aa)
     
  0.979
EDP00526
Predicted protein (338 aa)
     
  0.973
MOT45
Predicted protein (247 aa)
     
 
  0.959
TF2F
Transcription factor IIF (206 aa)
     
  0.911
EDP05471
SNF2 superfamily protein (1061 aa)
     
  0.904
EDP02557
Predicted protein (856 aa)
     
  0.904
EDO99484
SNF2 superfamily protein (797 aa)
     
  0.904
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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