STRINGSTRING
EDP00842 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00842" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00842Predicted protein (463 aa)    
Predicted Functional Partners:
EDP03259
Predicted protein (469 aa)
     
        0.651
EDO96539
Ankyrin-repeat protein (749 aa)
     
        0.640
EDP02246
Predicted protein (1150 aa)
     
        0.597
EDP08828
Predicted protein (706 aa)
     
        0.580
EDP05711
Predicted protein (1010 aa)
     
        0.542
SPCS
Selenocysteine synthase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis (483 aa)
     
        0.526
EDP05935
Predicted protein (901 aa)
     
        0.520
EDO97574
Predicted protein (761 aa)
     
        0.520
AGO3
Argonaute-like protein (1037 aa)
     
        0.517
EDO98351
Predicted protein (520 aa)
     
        0.515
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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