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EDP00856 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00856" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00856Predicted protein (456 aa)    
Predicted Functional Partners:
PRP6
Splicing factor, component of the U4/U6-U5 snRNP complex (947 aa)
     
  0.994
EDP03322
Predicted protein (811 aa)
     
  0.992
PRP8
Splicing factor, component of the U5 snRNP and of the spliceosome (2346 aa)
     
  0.992
EDP09509
Predicted protein (494 aa)
     
    0.991
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.989
SPL5
pre-mRNA-splicing factor (488 aa)
     
  0.989
XAB2
Transcription-coupled DNA repair protein (886 aa)
     
  0.988
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
  0.988
EDP09592
Predicted protein (698 aa)
     
    0.987
EDP05167
Predicted protein (1378 aa)
     
    0.986
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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