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EDP00880 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00880" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00880Predicted protein (82 aa)    
Predicted Functional Partners:
EDP07260
Predicted protein (69 aa)
     
        0.477
EDO98779
MRG family protein (207 aa)
     
        0.477
EDP07365
Predicted protein (293 aa)
     
        0.475
EDP01523
Predicted protein (366 aa)
     
        0.475
EDP00682
Transcription initiation factor TFIID, subunit TAF5 (522 aa)
     
        0.475
EDO97590
Predicted protein (1184 aa)
     
        0.475
EDP01095
Predicted protein (69 aa)
     
        0.428
AKR1
Aldo-keto-reductase-like protein (392 aa)
     
        0.428
EDO99635
Predicted protein (683 aa)
     
        0.426
DNJ19
DnaJ-like protein (482 aa)
     
        0.423
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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