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EDP00919 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00919" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00919Predicted protein (1205 aa)    
Predicted Functional Partners:
SYP8
Qa-SNARE protein, Ufe1/Syntaxin 18 family (333 aa)
     
  0.909
EDP00848
Predicted protein (2114 aa)
     
  0.775
COPB2
Beta’-cop (982 aa)
     
  0.660
EDO97475
Predicted protein (683 aa)
     
        0.656
RAD50
DNA repair protein (1410 aa)
     
 
  0.650
EDP02641
Predicted protein (957 aa)
     
        0.620
EDP04357
Paf1 complex component (973 aa)
     
 
    0.606
EDP04221
Predicted protein (1178 aa)
     
        0.597
COPD1
Delta-cop (511 aa)
     
  0.595
VAMP73
R-SNARE protein, VAMP72-family (220 aa)
     
  0.582
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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