STRINGSTRING
TCA1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"TCA1" - Translation factor for chloroplast petA RNA in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCA1Translation factor for chloroplast petA RNA (1103 aa)    
Predicted Functional Partners:
CPL1
Predicted protein (311 aa)
           
  0.692
CLR22
Predicted protein of CLR family (1636 aa)
     
        0.646
MCA1
Maturation/stability factor for petA mRNA (1068 aa)
           
  0.630
EDP07393
Predicted protein (949 aa)
     
        0.507
CLR7
Predicted protein of CLR family (1285 aa)
     
        0.504
EDP02232
Predicted protein (917 aa)
     
        0.502
EDP02268
Predicted protein (596 aa)
     
        0.480
EDP04541
Predicted protein (1091 aa)
     
        0.475
petA
Cytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (317 aa)
           
  0.473
FAP131
Flagellar associated protein (432 aa)
           
  0.472
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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