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EDP00964 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00964" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00964Predicted protein (1253 aa)    
Predicted Functional Partners:
SMC2
Structural maintenance of chromosomes protein 2 (1165 aa)
     
  0.999
SMC4
Structural maintenance of chromosomes protein 4 (1237 aa)
     
  0.999
EDP08900
Condensin complex subunit H protein (557 aa)
     
  0.998
EDP06267
Chromosome condensation complex protein (2665 aa)
     
  0.997
SMC5B
Structural maintenance of chromosomes protein 5B (1124 aa)
     
  0.957
EDP07530
Predicted protein (565 aa)
     
   
  0.949
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
 
  0.948
EDP04004
Predicted protein (1256 aa)
     
        0.948
EDP01241
Predicted protein (367 aa)
     
      0.941
SMC1
Structural maintenance of chromosomes protein 1 (818 aa)
     
  0.924
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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