STRINGSTRING
VPS37 protein (Chlamydomonas reinhardtii) - STRING interaction network
"VPS37" - Subunit of the ESCRT-I complex in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS37Subunit of the ESCRT-I complex (342 aa)    
Predicted Functional Partners:
VPS23
Subunit of the ESCRT-I complex (454 aa)
     
  0.989
VPS28
Subunit of the ESCRT-I complex (225 aa)
     
  0.986
VPS46
Subunit of the ESCRT-III complex (199 aa)
     
  0.833
VPS24
Subunit of the ESCRT-III complex (220 aa)
     
  0.831
VPS60
Subunit of the ESCRT-III complex (166 aa)
     
 
  0.814
VPS4
AAA-ATPase of VPS4/SKD1 family (436 aa)
         
  0.808
VPS20
Subunit of ESCRT-III complex (232 aa)
         
  0.747
MOT51
Predicted protein (4051 aa)
           
  0.711
BUG25
Basal body protein (1746 aa)
           
  0.711
POC7
Centriole proteome protein (183 aa)
           
  0.711
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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