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EDP00986 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00986" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00986Predicted protein (269 aa)    
Predicted Functional Partners:
CAF1
CCR4-associated factor (300 aa)
       
      0.670
PRP39
Nuclear pre-mRNA splicing factor and U1 snRNP component (476 aa)
     
        0.512
EDP08353
U5 snRNP-specific protein (330 aa)
     
        0.475
EDP05271
RNA processing protein (511 aa)
     
        0.475
EDP03298
mRNA cleavage and polyadenylation factor complex II subunit (423 aa)
     
        0.425
EDP05167
Predicted protein (1378 aa)
     
        0.423
EDP04828
Predicted protein (526 aa)
     
        0.413
EDP00294
Predicted protein (151 aa)
     
        0.407
SPL1
SF3A1 splicing factor 3a, subunit 1 (400 aa)
     
        0.406
EDP01779
Predicted protein (1143 aa)
     
        0.403
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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