STRINGSTRING
EDP00999 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00999" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00999Predicted protein (370 aa)    
Predicted Functional Partners:
RPN1
26S proteasome regulatory subunit (895 aa)
     
  0.989
RPN10
26S proteasome regulatory subunit (245 aa)
     
  0.985
EDP09543
Predicted protein (630 aa)
       
  0.980
RPT2
26S proteasome regulatory subunit (443 aa)
     
  0.971
EDO97761
Predicted protein (381 aa)
     
 
  0.967
UBQ2
Bi-ubiquitin (153 aa)
     
  0.959
UBQ4
Ubiquitin (242 aa)
     
  0.953
EDP07969
DNA damage inducible protein (472 aa)
     
 
  0.953
UBQ7
Ubiquitin-fusion protein (338 aa)
       
  0.952
UBQ6
Ubiquitin fusion protein (805 aa)
       
  0.952
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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