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EDP01026 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01026" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01026Predicted protein (421 aa)    
Predicted Functional Partners:
CPX2
Coproporphyrinogen III oxidase (349 aa)
     
        0.503
EDO96782
Predicted protein (233 aa)
     
        0.502
EDP05907
Predicted protein (233 aa)
     
        0.478
PSBP6
Lumen targeted protein (304 aa)
     
        0.476
SECY1
Preprotein translocase secY subunit (451 aa)
     
        0.476
MSCP1
Mitochondrial substrate carrier protein (368 aa)
     
        0.475
EDP00260
Chloroplast SRP54 subunit of signal recognition particle (549 aa)
     
        0.428
CHLG
Chlorophyll synthetase (383 aa)
     
        0.425
EDP02809
Predicted protein (254 aa)
     
        0.424
DVR1
3,8-divinyl protochlorophyllide a 8-vinyl reductase (415 aa)
     
        0.414
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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