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EDP01076 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01076" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01076Predicted protein (717 aa)    
Predicted Functional Partners:
EDP02641
Predicted protein (957 aa)
     
        0.697
EDO96824
Predicted protein (1255 aa)
     
        0.667
EDO97705
Predicted protein (478 aa)
     
        0.657
EDO98602
Predicted protein (300 aa)
     
        0.656
EDP02095
SEC7/BIG-like ARF-guanine nucleotide exchange factor (2150 aa)
     
        0.651
EDP04572
Predicted protein (1585 aa)
     
        0.648
VPS35
Subunit of retromer complex (739 aa)
     
        0.590
EDP09019
Predicted protein (2013 aa)
     
        0.590
EDP00919
Predicted protein (1205 aa)
     
        0.559
EDP05066
Predicted protein (1712 aa)
     
        0.554
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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