STRINGSTRING
EDP01091 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01091" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01091Predicted protein (218 aa)    
Predicted Functional Partners:
RPOD
Chloroplast RNA polymerase sigma factor, c (752 aa)
     
 
  0.557
EDP03130
Predicted protein (525 aa)
     
 
  0.557
EDO97376
DNA repair glycosylase (292 aa)
         
  0.532
NUOB10
NADH-ubiquinone oxidoreductase 17.8 kDa subunit (155 aa)
     
        0.513
EDP06649
Predicted protein (353 aa)
     
      0.504
NUOS5
NADH-ubiquinone oxidoreductase 10 kDa subunit (81 aa)
     
        0.503
EDP00290
Predicted protein (179 aa)
         
  0.473
EDO98356
Predicted protein (155 aa)
         
  0.473
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
       
 
  0.451
NUO3
NADH-ubiquinone oxidoreductase ND3 subunit; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (279 aa)
   
   
  0.437
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (8%) [HD]