STRINGSTRING
EDP01127 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01127" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01127Predicted protein (183 aa)    
Predicted Functional Partners:
EDO97935
Predicted protein (138 aa)
     
        0.649
EDP06016
Predicted protein (627 aa)
     
        0.561
EDO99324
Predicted protein (124 aa)
     
        0.524
EDP08778
Predicted protein (305 aa)
     
        0.517
EDP08692
Predicted protein (150 aa)
     
        0.517
MSRA3
Peptide methionine sulfoxide reductase (228 aa)
     
        0.511
EDO96554
Predicted protein (210 aa)
     
        0.511
EDO97939
Hypothetical protein (189 aa)
     
        0.509
EDP06758
Predicted protein (203 aa)
     
        0.505
FUM2
Fumarate hydratase (546 aa)
     
        0.504
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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