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OAD1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"OAD1" - Arginine/ornithine decarboxylase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAD1Arginine/ornithine decarboxylase (391 aa)    
Predicted Functional Partners:
RCL1
RNA terminal 3’ phosphate cyclase (370 aa)
 
            0.665
DLC7a
Flagellar outer dynein arm light chain LC7 (105 aa)
           
  0.576
EDP05194
Dynein heavy chain (5013 aa)
           
  0.479
EDP05741
Predicted protein (439 aa)
     
        0.426
EDP01522
Predicted protein (105 aa)
     
        0.423
EDP07506
Predicted protein (201 aa)
     
        0.419
LSP1
Signal transducer for phototaxis (716 aa)
     
        0.405
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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