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EDP01202 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01202" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01202Predicted protein (263 aa)    
Predicted Functional Partners:
SPL2
Splicing factor 3a, subunit 2 (287 aa)
       
    0.825
EDP01981
Predicted protein (110 aa)
     
 
  0.778
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
  0.756
MGO1
Mago nashi-like protein (148 aa)
     
  0.750
SPL3
SF3A3 splicing factor 3a, subunit 3 (508 aa)
     
 
    0.738
EDP08434
poly(A) binding protein (136 aa)
     
  0.733
EDP01159
Predicted protein (170 aa)
     
  0.732
EDP05167
Predicted protein (1378 aa)
     
 
  0.732
SMP11
Sm protein (100 aa)
     
 
    0.731
EDP08753
Predicted protein (279 aa)
     
 
  0.728
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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