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EDP01229 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01229" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01229Predicted protein (336 aa)    
Predicted Functional Partners:
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
   
 
      0.936
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
   
   
0.928
EDP08965
Predicted protein (349 aa)
       
 
  0.919
EDO97912
Predicted protein (315 aa)
 
 
        0.652
EDP09390
GCIP domain protein (151 aa)
     
      0.649
EDP09592
Predicted protein (698 aa)
     
      0.641
EDP09895
Predicted protein (261 aa)
     
      0.636
EDP07691
Predicted protein (286 aa)
 
            0.622
EDP09426
Predicted protein (63 aa)
       
      0.621
EDP05779
Predicted protein (150 aa)
       
      0.621
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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