STRINGSTRING
MKS1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"MKS1" - Ortholog of meckel syndrome 1 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MKS1Ortholog of meckel syndrome 1 (200 aa)    
Predicted Functional Partners:
EDP03154
Predicted protein (176 aa)
     
0.943
EDP08080
Predicted protein (581 aa)
     
0.902
POC12
Centriole proteome protein (1828 aa)
     
  0.737
EDP09100
Predicted protein (654 aa)
     
 
  0.727
NPH4
Nephrocystin-4-like protein (1772 aa)
     
 
  0.710
VFL1
Variable flagella protein 1 (1216 aa)
     
 
  0.587
MOT37
Predicted protein (735 aa)
         
  0.571
FAP234
Flagellar associated protein (1352 aa)
         
  0.571
MTA5a
Predicted protein (412 aa)
         
  0.571
DLC1
Flagellar outer dynein arm light chain LC1 (198 aa)
         
  0.571
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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