STRINGSTRING
TEF19 protein (Chlamydomonas reinhardtii) - STRING interaction network
"TEF19" - Low CO2-induced protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEF19Low CO2-induced protein (326 aa)    
Predicted Functional Partners:
EDP09748
Predicted protein (158 aa)
       
  0.669
EDP08722
Predicted protein (156 aa)
       
  0.669
EDO99861
Predicted protein (153 aa)
       
  0.669
UBC9
Ubiquitin conjugating enzyme (148 aa)
       
  0.669
EDO97335
Predicted protein (155 aa)
       
  0.669
LCI19
Gamma hydroxybutyrate dehydrogenase (292 aa)
           
  0.653
PP2C5
Protein phosphatase 2C-related protein (716 aa)
         
  0.624
LCI2
Low CO2 inducible gene (131 aa)
           
  0.575
UBC2
Ubiquitin-conjugating enzyme E2 (139 aa)
       
  0.559
EDP06467
Predicted protein (152 aa)
       
  0.510
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (9%) [HD]