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LCI2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LCI2" - Low CO2 inducible gene in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCI2Low CO2 inducible gene (131 aa)    
Predicted Functional Partners:
LCI5
low-CO2-inducible protein (235 aa)
           
  0.711
CAH1
Carbonic anhydrase (377 aa)
           
  0.576
TEF19
Low CO2-induced protein (326 aa)
           
  0.575
MCA1
Maturation/stability factor for petA mRNA (1068 aa)
           
  0.480
CAH2
Carbonic anhydrase, alpha type, periplasmic (380 aa)
           
  0.479
CCP1
low-CO2-inducible chloroplast envelope protein (358 aa)
           
  0.479
CCM1
Regulator of CO2-responsive genes (699 aa)
           
  0.477
CCP2
low-CO2-inducible chloroplast envelope protein (355 aa)
           
  0.476
LCI20
2-oxoglutarate/malate translocator (561 aa)
           
  0.467
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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