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MRPS13 protein (Chlamydomonas reinhardtii) - STRING interaction network
"MRPS13" - Mitochondrial ribosomal protein S13 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPS13Mitochondrial ribosomal protein S13 (124 aa)    
Predicted Functional Partners:
RPS24
Ribosomal protein S24 (131 aa)
     
  0.999
RPL7
Ribosomal protein L7 (266 aa)
   
  0.999
RPS5
Ribosomal protein S5 (193 aa)
   
  0.998
RPS15a
Ribosomal protein S15a (130 aa)
   
  0.998
rps7
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit (168 aa)
   
  0.998
rps8
Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (153 aa)
   
  0.998
RPS3
Ribosomal protein S3 (230 aa)
   
  0.998
rps3
Ribosomal protein S3 (712 aa)
   
  0.998
RPL17
Ribosomal protein L17 (186 aa)
   
  0.998
EDP06987
Predicted protein (159 aa)
   
  0.998
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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