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EDP01276 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01276" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01276Predicted protein (558 aa)    
Predicted Functional Partners:
PSY
Phytoene synthase (382 aa)
 
 
  0.806
EDP08879
Predicted protein (501 aa)
 
 
  0.802
EDP06129
Farnesyl-diphosphate farnesyltransferase (378 aa)
   
 
  0.734
ZDS1
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (582 aa)
 
 
  0.729
PDS1
Phytoene desaturase (564 aa)
 
 
  0.718
EDO96318
Predicted protein (523 aa)
 
 
  0.717
CHLD
Magnesium chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (767 aa)
   
   
  0.699
EDP03291
Predicted protein (196 aa)
   
 
  0.656
CHLG
Chlorophyll synthetase (383 aa)
 
   
  0.631
EDO96439
Predicted protein (144 aa)
     
 
  0.591
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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