STRINGSTRING
EDP01278 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01278" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01278Predicted protein (1232 aa)    
Predicted Functional Partners:
EDP04587
Cellular apoptosis susceptibility protein (397 aa)
     
      0.656
ASSD1
Aspartate semialdehyde dehydrogenase (370 aa)
       
      0.638
EDP03629
Predicted protein (383 aa)
     
      0.634
VPS11
Subunit of VPS-C complex (1102 aa)
     
        0.596
EDP01686
Predicted protein (969 aa)
     
    0.589
EDO95996
MSH2-like protein (221 aa)
     
 
  0.588
EDP01005
Predicted protein (594 aa)
     
 
  0.576
SSD3
Sterol sensing domain protein (717 aa)
     
 
  0.572
MOT39
Predicted protein (295 aa)
     
    0.572
EDP09518
Predicted protein (1408 aa)
     
    0.568
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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