STRINGSTRING
EDP01343 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01343" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01343Predicted protein (212 aa)    
Predicted Functional Partners:
EDP08817
Predicted protein (796 aa)
     
        0.517
EDP00307
Predicted protein (233 aa)
     
        0.479
EDO99953
Predicted protein (747 aa)
     
        0.479
LCI21
low-CO2-inducible protein (559 aa)
     
        0.478
EDP02651
Predicted protein (516 aa)
     
        0.478
ARP3
Actin-related protein (432 aa)
     
        0.477
EDP09043
Predicted protein (1130 aa)
     
        0.475
EDP06115
Predicted protein (1205 aa)
     
        0.475
NUP155
Nuclear pore protein (868 aa)
     
        0.475
EDP07012
Predicted protein (311 aa)
     
        0.425
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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