STRINGSTRING
LRG5 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LRG5" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRG5Predicted protein (681 aa)    
Predicted Functional Partners:
EDP00213
Predicted protein (338 aa)
     
  0.989
GPIT1
Glycosyl phosphatidyl inositol transamidase subunit (774 aa)
     
  0.985
EDP06780
Predicted protein (882 aa)
     
  0.947
VPE1
Vacuolar processing enzyme (661 aa)
     
  0.818
DNJ19
DnaJ-like protein (482 aa)
     
        0.519
EDP00682
Transcription initiation factor TFIID, subunit TAF5 (522 aa)
     
        0.509
EDP01523
Predicted protein (366 aa)
     
        0.504
EDP04417
Predicted protein (306 aa)
     
        0.479
EDP07505
Predicted protein (187 aa)
     
        0.478
EDP07674
Predicted protein (408 aa)
     
        0.477
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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