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CLH1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CLH1" - Chlorophyllase I in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLH1Chlorophyllase I (322 aa)    
Predicted Functional Partners:
CYP739A3
Cytochrome P450, CYP85 clan (549 aa)
     
   
  0.544
EDP08873
PAS domain protein (2071 aa)
           
  0.465
CYP744B1
Cytochrome P450, CYP711 clan (598 aa)
           
  0.461
MMP13
Matrix metalloproteinase-like protein (756 aa)
           
  0.461
DNJ15
DnaJ-like protein (517 aa)
           
  0.459
DNJ31
DnaJ-like protein (633 aa)
           
  0.459
MRPS17
Mitochondrial ribosomal protein S17 (206 aa)
           
  0.459
NRX2
Nucleoredoxin 2 (471 aa)
           
  0.429
RIR2A
Ribonucleoside-diphosphate reductase small chain (394 aa)
           
  0.429
TEF22
Predicted protein (633 aa)
           
  0.429
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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