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SPT2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SPT2" - Serine palmitoyltransferase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPT2Serine palmitoyltransferase (333 aa)    
Predicted Functional Partners:
SPT1
Component of serine palmitoyltransferase (435 aa)
   
0.997
EDP04696
Predicted protein (230 aa)
   
 
  0.949
SHMT3
Serine hydroxymethyltransferase 3; Interconversion of serine and glycine (487 aa)
       
  0.824
SHMT1
Serine hydroxymethyltransferase; Interconversion of serine and glycine (520 aa)
       
  0.824
SHMT2
Serine hydroxymethyltransferase 2; Interconversion of serine and glycine (472 aa)
       
  0.824
MAA7
Tryptophan synthase beta subunit (448 aa)
   
 
  0.823
TSA1
Tryptophan synthetase alpha subunit (258 aa)
   
 
  0.823
THD1
Threonine deaminase (631 aa)
     
  0.819
STD1
Serine/threonine dehydratase (340 aa)
     
  0.819
EDP06376
Predicted protein (132 aa)
       
    0.801
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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