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MMP13 protein (Chlamydomonas reinhardtii) - STRING interaction network
"MMP13" - Matrix metalloproteinase-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP13Matrix metalloproteinase-like protein (756 aa)    
Predicted Functional Partners:
EDP06453
Arylsulfatase-like protein (635 aa)
     
        0.693
EDP05368
Predicted protein (505 aa)
     
        0.656
EDO96489
Predicted protein (118 aa)
     
        0.651
EDO99917
Predicted protein (483 aa)
     
        0.645
EDO99009
Predicted protein (1066 aa)
     
        0.613
VSP3
Extracellular matrix protein (474 aa)
     
        0.591
EDP05056
Predicted protein (111 aa)
     
        0.582
EDP08504
Predicted protein (87 aa)
     
        0.572
EDP06171
Predicted protein (930 aa)
     
        0.559
EDP00555
Predicted protein (185 aa)
     
        0.545
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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