STRINGSTRING
EDP01468 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01468" - Programmed cell death protein 2 in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01468Programmed cell death protein 2 (568 aa)    
Predicted Functional Partners:
EDP04787
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (396 aa)
     
        0.755
EDP07550
Predicted protein (281 aa)
     
        0.744
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
        0.744
EDP02150
MAK16-like protein RBM13 (363 aa)
     
        0.738
EDP00683
Predicted protein (516 aa)
     
        0.734
EDP03935
Predicted protein (304 aa)
     
        0.733
PRMT3
Protein arginine N-methyltransferase (283 aa)
     
      0.732
EDP05784
Predicted protein (610 aa)
     
        0.729
EDP03163
Predicted protein (514 aa)
     
        0.717
EDP04709
Predicted protein (534 aa)
     
        0.714
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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