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EDP01479 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01479" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01479Predicted protein (1973 aa)    
Predicted Functional Partners:
EDO98539
Histone deacetylase (339 aa)
   
  0.916
EDO96250
Histone deacetylase (273 aa)
   
  0.911
EDP02188
Histone deacetylase (419 aa)
   
  0.906
EDP01149
Histone deacetylase (418 aa)
   
  0.906
EDO98875
Predicted protein (329 aa)
       
  0.870
EDP05135
SNF2 superfamily protein (1610 aa)
     
  0.843
EDP07222
Hypothetical protein (1678 aa)
     
  0.836
EDP03152
Predicted protein (419 aa)
     
  0.805
MUT11
Transcriptional repression protein (370 aa)
     
  0.777
TEF20
Notchless-like protein (290 aa)
     
  0.770
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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