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EDP01506 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01506" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01506Predicted protein (345 aa)    
Predicted Functional Partners:
EDP09941
Predicted protein (161 aa)
 
  0.924
EDO98937
Predicted protein (492 aa)
     
  0.882
EDP06649
Predicted protein (353 aa)
   
   
  0.841
EDP06926
Predicted protein (796 aa)
   
 
  0.826
EIF5Ba
Eukaryotic initiation factor (1651 aa)
   
 
  0.785
EDP00735
Predicted protein (403 aa)
   
   
  0.776
EDO99104
Predicted protein (369 aa)
   
   
  0.767
PYR5
Uridine 5’-monophosphate synthase (474 aa)
   
   
  0.746
EDP00155
Lysyl-trna synthetase, LysRS (591 aa)
   
   
  0.739
GTS1
Gln-glu non-discriminatory tRNA synthetase (763 aa)
   
   
  0.732
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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