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EDP01550 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01550" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01550Predicted protein (373 aa)    
Predicted Functional Partners:
TRM1
N2,N2-dimethylguanosine tRNA methyltransferase (410 aa)
     
 
  0.787
TRM4
tRNA-(m5C) methyltransferase (392 aa)
     
   
  0.726
EDP06674
Predicted protein (216 aa)
     
        0.723
TRM8
tRNA (guanine-7)-methyltransferase (246 aa)
     
 
  0.722
EDP05239
Predicted protein (543 aa)
     
        0.715
EDP09830
Predicted protein (461 aa)
     
        0.704
EDP09234
Predicted protein (613 aa)
     
        0.681
EDP07462
Predicted protein (940 aa)
     
        0.676
ANK21
Predicted protein (201 aa)
     
        0.664
EDP03968
Predicted protein (319 aa)
     
        0.657
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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