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EDP01555 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01555" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01555Predicted protein (662 aa)    
Predicted Functional Partners:
SEC13L
COP-II coat subunit, nucleoporin (338 aa)
     
    0.940
EDP02867
Predicted protein (450 aa)
     
 
  0.898
EDO96335
Predicted protein (540 aa)
     
 
  0.869
EDP06719
Predicted protein (151 aa)
     
  0.850
EDP00317
RAN GTPase activating protein, RANGAP1 (498 aa)
     
 
  0.830
RAE1
mRNA export protein (352 aa)
     
  0.825
NUP155
Nuclear pore protein (868 aa)
     
 
  0.811
IPB1
Importin beta (832 aa)
     
  0.785
ABH1
mRNA cap-binding protein (1134 aa)
     
 
    0.761
EDP03083
Predicted protein (188 aa)
     
  0.751
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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