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EDP01558 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01558" - aspartyl-tRNA synthetase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01558aspartyl-tRNA synthetase (545 aa)    
Predicted Functional Partners:
EDP06926
Predicted protein (796 aa)
   
  0.997
EDO99518
Predicted protein (1177 aa)
   
  0.984
EDO99104
Predicted protein (369 aa)
   
  0.970
GTS1
Gln-glu non-discriminatory tRNA synthetase (763 aa)
   
  0.967
EDP06304
Predicted protein (446 aa)
   
  0.953
EDP01392
Predicted protein (301 aa)
   
  0.938
PRORS1
Organellar class II aminoacyl tRNA synthetase (580 aa)
   
  0.934
EDO97327
Predicted protein (403 aa)
   
  0.909
EDO97326
Predicted protein (246 aa)
   
  0.902
EDP09941
Predicted protein (161 aa)
   
  0.876
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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