STRINGSTRING
EDP01571 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01571" - RNA binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01571RNA binding protein (133 aa)    
Predicted Functional Partners:
EDP01082
Predicted protein (186 aa)
     
 
  0.980
EDP03322
Predicted protein (811 aa)
     
 
  0.970
EDP02096
Predicted protein (195 aa)
     
 
  0.965
EDO98006
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1085 aa)
     
 
  0.959
EDO97595
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1078 aa)
       
 
  0.957
EDO97886
Predicted protein (110 aa)
     
 
  0.939
EDP09724
Predicted protein (830 aa)
       
      0.938
EDO96746
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (444 aa)
     
 
  0.890
EDP08357
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (396 aa)
     
 
0.860
EDP00494
Predicted protein (73 aa)
     
      0.838
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (2%) [HD]