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ICL1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"ICL1" - Isocitrate lyase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ICL1Isocitrate lyase (417 aa)    
Predicted Functional Partners:
MAS1
Malate synthase (546 aa)
 
  0.999
CIS2
Citrate synthase (496 aa)
     
   
  0.852
ACS3
Acetyl CoA synthetase (667 aa)
     
 
  0.817
PCK1a
Phosphoenolpyruvate carboxykinase, splice variant (610 aa)
   
   
  0.737
CIS1
Citrate synthase (469 aa)
     
   
  0.727
MDH1
Malate dehydrogenase (355 aa)
     
   
  0.696
MDH2
Malate dehydrogenase (353 aa)
     
   
  0.692
MDH4
Malate dehydrogenase (373 aa)
     
   
  0.692
MDH3
NAD-dependent malate dehydrogenase (302 aa)
     
   
  0.661
ACS1
Acetyl CoA synthetase (664 aa)
     
 
  0.638
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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