STRINGSTRING
TF2F protein (Chlamydomonas reinhardtii) - STRING interaction network
"TF2F" - Transcription factor IIF in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TF2FTranscription factor IIF (206 aa)    
Predicted Functional Partners:
EDP01523
Predicted protein (366 aa)
     
  0.987
EDP00682
Transcription initiation factor TFIID, subunit TAF5 (522 aa)
     
 
  0.985
EDP06512
TafII-250 protein (625 aa)
     
 
  0.984
EDP00526
Predicted protein (338 aa)
     
  0.962
EDP03495
Predicted protein (121 aa)
     
 
  0.956
EDP06932
ATM/ATR-like kinase (4723 aa)
     
  0.949
EDP03314
Predicted protein (578 aa)
     
  0.945
ARP4
Actin-related protein (458 aa)
     
  0.942
EDO98779
MRG family protein (207 aa)
     
  0.939
EDP05450
Global transcription factor (325 aa)
       
 
  0.932
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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