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EDP01604 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01604" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01604Predicted protein (222 aa)    
Predicted Functional Partners:
MND1
GAJ-like protein (223 aa)
     
  0.964
SPO11A
Topoisomerase; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity (414 aa)
     
 
  0.705
RAD51
DNA recombination protein (343 aa)
     
  0.677
SPO11B
Topoisomerase (1873 aa)
       
 
  0.630
DMC1
Rad51-like protein (343 aa)
     
  0.563
RPA70A
Replication protein A, 70 kDa DNA-binding subunit (451 aa)
     
 
    0.549
RECA
Chloroplast RecA recombination protein (415 aa)
     
  0.543
EDP04478
RecA-like protein (238 aa)
     
  0.543
EDP05579
Hypothetical protein (355 aa)
     
        0.501
DNJ13
DnaJ-like protein (433 aa)
     
        0.499
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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