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HBP1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"HBP1" - Histone gene transcript 5' hairpin-binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HBP1Histone gene transcript 5’ hairpin-binding protein (166 aa)    
Predicted Functional Partners:
SMP9
Small nuclear ribonucleoprotein Sm D1 (114 aa)
     
  0.735
EDP09817
Predicted protein (91 aa)
       
 
  0.727
MCM7
Minichromosome maintenance protein 7 (724 aa)
     
        0.718
EDO98078
Predicted protein; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (478 aa)
     
        0.718
EDO98236
Predicted protein (130 aa)
     
        0.690
CDC20
Activator and specificity subunit of anaphase promoting complex (477 aa)
     
        0.686
MCM3
Minichromosome maintenance protein 3 (608 aa)
     
        0.676
MCM4
Minichromosome maintenance protein 4 (544 aa)
     
        0.649
RIR1
Ribonucleoside-diphosphate reductase large subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (878 aa)
     
        0.631
LIG1
DNA ligase (813 aa)
     
        0.622
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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