STRINGSTRING
PRFA2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PRFA2" - Hypothetical protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRFA2Hypothetical protein (336 aa)    
Predicted Functional Partners:
EDP09845
N6-DNA-methyltransferase (223 aa)
   
 
  0.935
EDP01466
Predicted protein (190 aa)
   
 
  0.935
MRPS9
Mitochondrial ribosomal protein S9 (342 aa)
   
 
  0.781
MRPL1
Mitochondrial ribosomal protein L1 (169 aa)
   
  0.774
EDP08757
Predicted protein (399 aa)
   
   
  0.772
EDP04387
Predicted protein (399 aa)
   
   
  0.772
rps9
Ribosomal protein S9 (191 aa)
   
 
  0.752
MRPL13
Mitochondrial ribosomal protein L13 (277 aa)
   
 
  0.751
PRPL1
Plastid ribosomal protein L1 (297 aa)
   
  0.750
PRPL13
Plastid ribosomal protein L13 (225 aa)
   
 
  0.740
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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