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EDP01654 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01654" - RNA-binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01654RNA-binding protein (704 aa)    
Predicted Functional Partners:
EDO98390
Polyadenylate binding protein (464 aa)
     
 
  0.862
EDO97396
Predicted protein (430 aa)
       
      0.685
MRCE1
mRNA capping enzyme with dual 5’ triphosphatase and guanylyltransferase activities (528 aa)
     
      0.679
EDP07085
Predicted protein (1200 aa)
     
      0.671
EDO96801
Predicted protein (2261 aa)
     
        0.654
TRN1
Transportin (898 aa)
       
      0.653
FAP234
Flagellar associated protein (1352 aa)
     
 
  0.601
EDO97302
Histone methyltransferase (2487 aa)
     
      0.542
EDO98656
Predicted protein (1580 aa)
     
      0.535
EDO99332
Predicted protein (789 aa)
     
        0.523
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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