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MUT68 protein (Chlamydomonas reinhardtii) - STRING interaction network
"MUT68" - Polyadenylate polymerase beta nucleotidyltransferase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MUT68Polyadenylate polymerase beta nucleotidyltransferase (711 aa)    
Predicted Functional Partners:
TRF4
Trf4 poly(A) polymerase (1144 aa)
     
   
  0.900
PAP1
Poly(a) polymerase (407 aa)
     
 
  0.895
MTR4
DEAD-box family ATP dependent helicase (945 aa)
     
 
  0.895
XRN1
Single-stranded RNA 5’->3’ exonuclease (171 aa)
     
 
  0.815
LSM1
Sm protein LSm1 (126 aa)
     
   
  0.807
RRP40
3’-5’ exonuclease component of the exosome (231 aa)
     
   
  0.779
UPF1
UPF1 protein (800 aa)
     
 
  0.778
LSM2
Sm-D1 protein (93 aa)
       
 
  0.720
POL1A
PolI-like DNA polymerase (498 aa)
     
 
  0.678
EDP01505
Predicted protein (299 aa)
     
 
  0.677
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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