STRINGSTRING
EDP01698 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01698" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01698Predicted protein (1941 aa)    
Predicted Functional Partners:
EDP01241
Predicted protein (367 aa)
     
   
  0.943
EDP00964
Predicted protein (1253 aa)
     
        0.921
EDP04004
Predicted protein (1256 aa)
     
        0.909
SMC4
Structural maintenance of chromosomes protein 4 (1237 aa)
     
        0.900
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
        0.894
EDP07530
Predicted protein (565 aa)
     
        0.881
EDO99097
Predicted protein (530 aa)
     
        0.867
SMC2
Structural maintenance of chromosomes protein 2 (1165 aa)
     
        0.856
EDP04084
Predicted protein (1377 aa)
     
        0.844
EDP08900
Condensin complex subunit H protein (557 aa)
     
        0.836
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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