STRINGSTRING
EDP01785 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01785" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01785Predicted protein (252 aa)    
Predicted Functional Partners:
EDP00845
Predicted protein (428 aa)
     
        0.519
EDP06180
Predicted protein (237 aa)
     
        0.503
VSR1
Vacuolar sorting receptor (700 aa)
     
        0.501
SEC6
Component of the exocyst complex (763 aa)
     
        0.489
EDO99200
Predicted protein (842 aa)
     
        0.480
APG4
Autophagy protein (484 aa)
     
        0.475
EDP01193
Predicted protein (551 aa)
     
        0.475
EDO97086
Predicted protein (156 aa)
     
        0.475
EDP07348
Predicted protein (756 aa)
     
        0.468
EDP06440
Predicted protein (559 aa)
     
        0.429
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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