STRINGSTRING
CGL21 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CGL21" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGL21Predicted protein (285 aa)    
Predicted Functional Partners:
SHKD1
Dehydroquinate dehydratase (554 aa)
     
        0.666
EDP02085
Predicted protein (499 aa)
     
        0.649
SHKH1
Chorismate synthase (422 aa)
     
        0.648
TOC75
75 kDa chloroplast membrane translocon (798 aa)
     
        0.634
THS1
Threonine synthase (498 aa)
     
        0.599
EDO98760
Predicted protein (1455 aa)
     
        0.591
CPN60B1
Chaperonin 60B1 (580 aa)
     
        0.588
EDP03593
Predicted protein (462 aa)
     
        0.584
EDP06219
Predicted protein (383 aa)
     
        0.574
CGL37
Shikimate kinase-related protein (324 aa)
     
        0.574
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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