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EDP01840 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01840" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01840Predicted protein (3607 aa)    
Predicted Functional Partners:
EDP08951
Predicted protein (886 aa)
     
   
  0.657
SEC13
COP-II coat subunit (299 aa)
       
    0.573
EDO99245
Predicted protein (296 aa)
     
        0.571
FAP277
Flagellar associated protein, protease inhibitor-like protein (390 aa)
       
  0.570
RABD1
Small rab-related GTPase (203 aa)
         
  0.548
EDP06281
Predicted protein (193 aa)
     
        0.526
EDP07468
Predicted protein (122 aa)
     
        0.517
EDO96692
Predicted protein (374 aa)
     
        0.517
EDO95808
Predicted protein (218 aa)
     
        0.507
EDP06379
Squamosa promoter binding protein (72 aa)
     
        0.505
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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