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EDP01841 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01841" - Sin3 complex component in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01841Sin3 complex component (136 aa)    
Predicted Functional Partners:
REF1
RNA export factor (137 aa)
     
 
    0.839
EDP02188
Histone deacetylase (419 aa)
     
  0.678
EDP01149
Histone deacetylase (418 aa)
     
  0.678
EDO98539
Histone deacetylase (339 aa)
     
  0.678
EDO96250
Histone deacetylase (273 aa)
     
  0.678
EDO96788
SIN3 component of histone deacetylase complex (542 aa)
       
  0.640
EDP09315
High mobility group protein (552 aa)
     
      0.639
EDP09691
Predicted protein (513 aa)
     
      0.635
EDO98837
Predicted protein (475 aa)
       
      0.626
NIS1
Nicastrin (783 aa)
       
      0.626
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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